Read Pearl. I think his online intros should give you a good idea of what the cocktail napkin looks like.
Hmm... Pearl uses a lot of diagrams but they all seem pretty ad-hoc. Just the sorts of arrows and dots and things that you'd use to represent any graph (in the mathematics sense). Should I infer from this description that the answer is, "No, there isn't a standard"?
I was picturing something like a legend that would tell someone, "Use a dashed line for a causal boundary, and a red dotted line to represent a logical inference, and a pink squirrel to represent postmodernism"
According to Ingredients of Timeless Decision Theory, when you set up a factored causal graph for TDT, "You treat your choice as determining the result of the logical computation, and hence all instantiations of that computation, and all instantiations of other computations dependent on that logical computation", where "the logical computation" refers to the TDT-prescribed argmax computation (call it C) that takes all your observations of the world (from which you can construct the factored causal graph) as input, and outputs an action in the present situation.
I asked Eliezer to clarify what it means for another logical computation D to be either the same as C, or "dependent on" C, for purposes of the TDT algorithm. Eliezer answered:
I replied as follows (which Eliezer suggested I post here).
If that's what TDT means by the logical dependency between Platonic computations, then TDT may have a serious flaw.
Consider the following version of the transparent-boxes scenario. The predictor has an infallible simulator D that predicts whether I one-box here [EDIT: if I see $1M]. The predictor also has a module E that computes whether the ith digit of pi is zero, for some ridiculously large value of i that the predictor randomly selects. I'll be told the value of i, but the best I can do is assign an a priori probability of .1 that the specified digit is zero.