Okay, but don't make the mistake of the guy who says "The mainstream media is all lies - so I'll only trust what I read on shady Internet conspiracy sites". Saying that there are likely flaws in mainstream medical research doesn't license you to discount any specific medical finding unless you have particular reason to believe that finding is false. And it certainly doesn't license you to place more credibility in small, poorly performed studies that contradict large, well-performed studies, or in fringe theories that contradict mainstream theories. Unless you hold your favorite theory, be it anti-vax, paleo-diet, or whatever, to the same high standard you hold the medical mainstream, every true fact you learn about flaws in medical research makes you stupider.
The study mentioned above looks at exciting cutting-edge research over the past decade. It says that 40% or so was proven wrong. This is good and to the credit of medical science! It means the system is working as it should in retesting things and getting the false stuff out. The basis of science isn't getting everything right the first time, it's making sure everyone's work gets checked and double-checked until only the truth survives. An unreplicated study in almost any area is an intriguing possibility and nothing more; medicine is no exception. If the media makes a big deal about a new study and publishes "VITAMIN B CURES BREAST CANCER!!!" in 72 point font in the newspapers, that is an interesting fact about the media and the people who believe it, but not an interesting fact about medical science.
Good doctors are both conservative and utilitarian. They stick to older, well-proven treatments unless the advantage of a new treatment is so great that it outweighs the uncertainty and risks involved. IMHO the medical consensus has been right on the important things a surprising amount of the time.
I would strongly discourage people from bewaring statins overly much. I don't see anything by Ioannidis saying the studies surrounding statins are particularly bad. Ioannidis says research is less likely to be true if it has low sample sizes, low effect sizes, bias, and a wide net. There have been several statin trials with sample sizes in the thousands to tens of thousands (see: JUPITER, SSSS, etc.) They've found that death rate from heart attacks in people correctly prescribed statin goes down by 30%, which is not at all a small effect size. Many such trials have not been linked to statin manufacturers or anyone with an axe to grind. And because people already know statins are supposed to reduce cholesterol, there is much less of a wide net than if you were to give a bunch of people statins and, say, see if any diseases became less common - the studies had a clearly designated endpoint, which they achieved.
Are there people who suggest the side effects of statins are worse than everyone else thinks? A few, and based off of very little evidence (I believe the idea that statins cause memory dysfunction is based mostly off isolated case reports, and there are only 60 out of many years of hundreds of thousands of people on statins - basically background noise). I haven't investigated this thoroughly, but the side effects would have to be pretty darned bad and pretty darned robust to stop prescribing a drug with an NNT in the two digits (ie it takes under 100 statin prescriptions to prevent one heart attack), and I treat people trying to exaggerate drug side effects as just as real a failure mode as doctors trying to exaggerate drug benefits, and use just as much caution.
The advice in the third-to-last paragraph, except perhaps the specific singling out of statins, remains excellent.
Overall, the use of the term "license" here raises yellow flags for me (see Hero Licensing for the basic reason). It conflates social standing with epistemic standing. The first paragraph here seems a bit confused in other ways too, let me try to break it up into what I see as comparatively crisp distinct claims.
CLAIM: Saying that there are likely flaws in mainstream medical research [...] doesn't license you to place more credibility in small, poorly performed studies that contradict large, well-performed studies, or in fringe theories that...
In a recent article, John Ioannidis describes a very high proportion of medical research as wrong.
Part of the problem is that surprising results get more interest, and surprising results are more likely to be wrong. (I'm not dead certain of this-- if the baseline beliefs are highly likely to be wrong, surprising beliefs become somewhat less likely to be wrong.) Replication is boring. Failure to replicate a bright shiny surprising belief is boring. A tremendous amount isn't checked, and that's before you start considering that a lot of medical research is funded by companies that want to sell something.
Ioannidis' corollaries:
The culture at LW shows a lot of reliance on small inferential psychological studies-- for example that doing a good deed leads to worse behavior later. Please watch out for that.
A smidgen of good news: Failure to Replicate, a website about failures to replicate psychological findings. I think this could be very valuable, and if you agree, please boost the signal by posting it elsewhere.
From Failure to Replicate's author-- A problem with metastudies:
The people I've read who gave advice based on Ioannidis article strongly recommended eating paleo. I don't think this is awful advice in the sense that a number of people seem to actually feel better following it, and I haven't heard of disasters resulting from eating paleo. However, I don't know that it's a general solution to the problems of living with a medical system which does necessary work some of the time, but also is wildly inaccurate and sometimes destructive.
The following advice is has a pure base of anecdote, but at least I've heard a lot of them from people with ongoing medical problems. (Double meaning intended.)
Before you use prescription drugs and/or medical procedures, make sure there's something wrong with you. Keep an eye out for side effects and the results of combined medicines. Check for evidence that whatever you're thinking about doing actually helps. Be careful with statins-- they can cause reversible memory problems and permanent muscle weakness. Choose a doctor who listens to you.
Forum about self-experimentation-- note: even Seth Roberts is apt to oversell his results as applying to everyone.
Link about the failure to replicate site found here.