Perplexed comments on Dawkins and Dennett defend Adaptationism [Links] - Less Wrong
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Comments (18)
I suppose the epistemological point that Lewontin would harp on here is that if you go in expecting Nature to only do things that seem well-motivated and 'natural', then you are going to produce ideologically biased science.
But as to whether evolution can produce complex 'designed-looking' characteristics that are not positively adaptive, give a look to this single-topic blog by Arlin Stoltzfus and this paper discussing an idea known as Constructive Neutral Evolution (pdf).