Nice link, thanks for sharing.
Normal, non-argumentative conversation is a good place to practice noticing misunderstandings. (Just stuff like assumptions about who's going where, when something is taking place, or where people are starting from) Since the participants aren't trying to win an argument, its easier to take a step back and realize that you're not on the same page. Doing this a few times makes it easier to do in "arguments".
If you're talking with someone with a similar inferential landscape as you and it seems like they're talking about something completely different, there's a pretty good chance that they're talking about something completely different.
And if they're not inferentially close, you're really probably talking about different things. Mind the gap.
Even though this was written by a current Less Wrong poster (hi, pdf23ds!), I don't think it has been posted here: Why and how to debate charitably (pg. 2, comments). (Edit: The original pdf23ds.net site has sadly been lost to entropy – Less Wrong poster MichaelBishop found a repost on commonsenseatheism.com. He also provides this summary version.)
I was linked to this article from a webcomic forum which had a low-key flamewar smouldering in the "Serious Business" section. (I will not link to it here; if you can tell from the description which forum it is, I would thank you not to link it either.) Three things struck me about it:
The list of rules is on pg. 2 - a good example is the rule titled "You cannot read minds":