I can't find the source but I recall reading the following interesting point: different people might possess different degrees of qualia, perhaps ranging down to none, and that perhaps some or all of the debate could be explained by this fact. So maybe it's just your brain. You've read the qualia wikipedia article I assume? It's a pretty obvious concept for most people- whether or not it is 'real'. Perhaps you recall wondering as a child if when other people saw something green they saw the same color you did: "Maybe what you see when you look at things called 'green' is what I see when I look at things called 'orange'. How would we know?'" The aspect of color that cannot be communicated and generates this worry is the qualia of 'greenness',
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I encounter many intelligent people (not usually LWers, though) who say that despite our recent scientific advances, human consciousness remains a mystery and currently intractable to science. This is wrong. Empirically distinguishable theories of consciousness have been around for at least 15 years, and the data are beginning to favor some theories over others. For a recent example, see this August 2011 article from Lau & Rosenthal in Trends in Cognitive Sciences, one of my favorite journals. (Review articles, yay!)
Abstract: