asr comments on Malthusian copying: mass death of unhappy life-loving uploads - Less Wrong
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I had assumed we were talking about low-level emulation: the program explicitly models each neuron, and probably at a lower level than that. And physical simulation is a well understood problem and my impression is that the chemists are pretty good at it.
Trying to do some clever white-box reimplementation of the algorithm I agree is probably intractable or worse. The emulation will be very far from the optimal implementation of the mind-program in question.