To summarize (mostly for my sake so I know I haven't misunderstood the OP):

• 1.) Subjective conscious experience or qualia play a non-negligible role in how we behave and how we form our beliefs, especially of the mushy (technical term) variety that ethical reasoning is so bound up in.
• 2.) The current popular computational flavor of philosophy of mind has inadequately addressed qualia in your eyes because the universality of the extended church-turing thesis, though satisfactorily covering the mechanistic descriptions of matter in a way that provides for emulation of the physical dynamics, does not tell us anything about what things would have subjective conscious experiences.
• 3.) Features of quantum mechanics such as entanglement and topological structures in a relativistic quantum field provide a better ontological foundation for your speculative theories of consciousness which takes as inspiration phenomenology and a quantum mondadology.

EDIT: I guess the shortest synopsis of this whole argument is: we need to build qualia machines, not just intelligent machines, and we don't have any theories yet to help us do that (other than the normal, but delightful, 9 month process we currently use). I can very much agree with #1. Now, with #2, it is true that the explanatory gap of qualia does not yield to the computational descriptions of physical processes, but it is also true that the universe may just be constructed such that this computational description is the best we can get and we will just have to accept that qualia will be experienced by those computational systems that are organized in particular ways, the brain being one arrangement of such systems. And, for #3, without more information about your theory, I don't see how appealing to ontologically deeper physical processes would get you any further in explaining qualia, you need to give us more.