I suspect the reason this article has been downvoted more than a few times is because it sounds like FUD. To fix this, focus on what the right way to do things is, rather than focusing on concern about "thing X". It's not that concern is a wrong feeling to have, it's just that it's impossible to communicate it honestly in this way, because of the prevalence of FUD tactics.
I didn't downvote, but the title did trigger Betteridge's law of headlines for me. That alone might have been enough to inspire a downvote, if I'd been in a less forgiving mood.
http://www.iea.org.uk/in-the-media/press-release/%E2%80%98evidence-based%E2%80%99-policies-are-damaging-uk-policymaking
Those in favour of evidenced based policies have tended to be dismissive, arguing that this is just a case of lack of evidence, rather than a problem with evidence-based policies per se.
https://twitter.com/bengoldacre/status/370159847985381376
I'm not fully convinced though. I've started reading Taking the medicine: a short history of medicine's beautiful idea and our difficulty swallowing it by Druin Burch, and this has plenty of examples of people saying something like "Of course, up till now medicine has been totally wrong, but I've got a new way of doing it right" - and then going on to make the same old mistakes. Maybe evidence based practice is the same, just a way of convincing ourselves that we've got it right this time.
As I see it, the trouble with evidence based practice is that what counts as evidence based today doesn't meet tomorrows higher standards. This means
At the root of this is the insistence that evidence must meet some 'gold standard'. This seems to be too much the frequentist viewpoint, but in the end we have to be Bayesians, taking all evidence into account.