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skeptical_lurker comments on LINK: Nematode brain uploaded with success - Less Wrong Discussion
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Basic Python is very slow, but numerical computing libraries such as Numpy are almost as fast as C, and Cython can compile Python into C if you add in type declarations. (more reasons why Python is awsome!)
I would imagine that you might use numerical computing libraries for neural simulations, so their program might have been running at close to C speeds.