I think the idea of "meta-rationality" is that evaluating hypotheses using Bayes' rule isn't the limiting factor for humans. The hard part is coming up with good hypotheses. For that you need to make your mind a bit crazy and free, in a way that's hard to describe in Bayesian terms. That applies to both science and art, and LW doesn't really equip you for it.
If common sense, and its associated logic, could answer the questions it poses, there would never have been philosophy, or a desire for it. The classic philosophical questions like "where did everything come from" cannot be answered by common sense, and therefore the answer, whatever it is, must be crazy, in common sense terms.
To take an analogy, mathematicians could not answer every question in terms of integers, the counting numbers of common sense, so they had to invent fractions, and then real numbers, and eventually complex numbers, which in...