It feels as if you may be trying to correct a mistake I'm not making
Nope, you just have all your defensive shields up and at full power :-) I am agreeing with you here.
Full power is more dramatic than that :-).
My experience is that if someone begins "Well, yes" rather than, say, just "Yes", their intention is generally something less positive than simply agreeing with you. ("Well, yes. What kind of idiot would need that to be said explicitly?" "Well, yes, but you're forgetting about X, Y, and Z." "Well, yes, I suppose so, but I don't think that's actually quite the right question.")
If it's worth saying, but not worth its own post (even in Discussion), then it goes here.
Notes for future OT posters:
1. Please add the 'open_thread' tag.
2. Check if there is an active Open Thread before posting a new one. (Immediately before; refresh the list-of-threads page before posting.)
3. Open Threads should be posted in Discussion, and not Main.
4. Open Threads should start on Monday, and end on Sunday.