stevehsu
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stevehsu has not written any posts yet.
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it seems to me that you end up getting African clusters that can be as far apart from each other as they are from Europeans. <
I doubt this would be the case as measured by fst. Note that distance on a principal components graph is not the same as fst: the components might be optimized to separate the clusters of choice (optimize the directions in gene space which show the most variance between the groups). It's possible in principle that some groups (e.g., pygmies) in Africa have been as effectively separated in gene flow from other Africans as, say, Nigerians and Europeans. More likely, the fst distance between any two groups of... (read more)
I'm typing this on an iPad so apologies for mistakes. A picture for you here:
http://infoproc.blogspot.com/2009/06/genetic-clustering-40-years-of-progress.html
Yes, there are clines, but so what? The population fraction in the clinal region between the major groups is tiny.
The distance (e.g. measured by fst) between the continental groups is so large that you would have to stand on your head to not "discover" those as separate clusters.
See also here http://infoproc.blogspot.com/2008/11/human-genetic-variation-fst-and.html
OK, so we just differ in nuances of definition. If you prefer ethnicity to race, that's fine with me.
The usual lame argument is "race doesn't exist, so how could there be group differences" -- but I think neither of us is arguing that side.