TimS comments on Open Thread, April 15-30, 2013 - Less Wrong
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Skimming the PNAS paper, it appears that the conclusion is that evolved group co-operation is not mathematically stable without evolved altruistic punishment. I.e. populations with only evolved co-operation drift towards populations without any group focused evolved traits, but altruistic punishment seems to exclude enough defectors that evolved co-operation maintained frequency in the population.
Which makes sense, but I'm nowhere close to qualified to judge the quality of the paper or its implications for evolutionary theory.